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The AMSTERDAM UMC FOUNDATION has issued a Tender notice for the procurement of a Replacing Genome Variant Annotation, Filtering and Interpretation Software in the Netherlands. This Tender notice was published on 14 May 2026 and is scheduled to close on 08 Jun 2026, with an estimated Tender value of Refer Document. Interested bidders can access detailed Tender information, eligibility criteria, and complete bidding documents by referencing TOT Ref No. 141255244, while the tender notice number is RD and Registering on the platform.
Procurement Summary
Country: Netherlands
Summary: Replacing Genome Variant Annotation, Filtering and Interpretation Software
Deadline: 08 Jun 2026
Posting Date: 14 May 2026
Other Information
Notice Type: Tender
TOT Ref.No.: 141255244
Document Ref. No.: RD
Competition: ICB
Financier: Self Financed
Purchaser Ownership: Public
Tender Value: Refer Document
CPV Classification
48180000 - Medical software packagePurchaser's Detail
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Login to see detailsTender Details
Replacing Genome Variant Annotation, Filtering And Interpretation Software Omschrijving:Data from the sequencer is processed through a bioinformatics pipeline (currently GATK, soon transitioning to DRAGEN), which outputs all possible variants relative to the reference genome in tabular form in a VCF file. This VCF file is imported into the software, where annotation first takes place: all valid variants are separated from invalid variants based on quality parameters. Because this results in a large number of variants, they are subsequently filtered based on laboratory defined criteria, such as genomic position, population frequency, known pathogenicity based on literature or insilico prediction tools. All remaining variants must then be interpreted using various tools/databases. The software supports the use and visualisation of data from these tools, enabling fast and efficient interpretation — including through an AI tool that proposes the most likely causal variant for the disorder. Hoofdopdracht (CPV code):48180000-3 Medical software
Legal Framework: Procurement Act 2012 Command Type: Deliveries Procedure: Public Keywords: bioinformatics, human genetics Main assignment (CPV code): 48180000-3 Medical software Place of Performance NUTS code: Greater Amsterdam (NL32B) Tendered Reference Number: 577692 Related Publications: 13 mei 2026
Documents
Annex-I9b-Program-of-Requirements-Functional-and-list-of-wishes-7-.xlsx
Bijlage-2-Formulier-NVI-2-.xlsx
guideline-genome-variant-interpretation-software-2026.docx
Annex-A6-Clouddiensten-beleidskader--Dienst-ICT--Amsterdam-UMC-Versie-1-1-.pdf
Annex-A4-BoZ-model-data-processing-agreement-2022-version-NFU-2-.docx
Annex-I9a-Program-of-requirements-ICT-1-.xlsx
Annex-F1-Combination-statement-2-.docx
Annex-H1-Reference-information-form-1-.doc
Annex-H2-Confidentaility-statement.doc
Annex-A5-Waiting-room-Aggreement.docx
Annex-A3-GPC-Additions-Amsterdam-UMC-location-AMC-and-VUMC-ENG-Versie-6-1-.pdf
Annex-A2-General-Purchase-Conditions-Amsterdam-UMC-NFU-ENG-Versie-3-1-.pdf
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