Replacing Genome Variant Annotation, Filtering Tender - 140347770

Procurement Summary

Country: Netherlands

Summary: Replacing Genome Variant Annotation, Filtering and Interpretation Software

Deadline: 20 May 2026

Posting Date: 29 Apr 2026

Other Information

Notice Type: Tender

TOT Ref.No.: 140347770

Document Ref. No.: RD

Competition: ICB

Financier: Self Financed

Purchaser Ownership: Public

Tender Value: Refer Document

CPV Classification

48180000 - Medical software package

Purchaser's Detail

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Tender Details

Data from the sequencer is processed through a bioinformatics pipeline (currently GATK, soon transitioning to DRAGEN), which outputs all possible variants relative to the reference genome in tabular form in a VCF file. This VCF file is imported into the software, where annotation first takes place: all valid variants are separated from invalid variants based on quality parameters. Because this results in a large number of variants, they are subsequently filtered based on laboratory defined criteria, such as genomic position, population frequency, known pathogenicity based on literature or insilico prediction tools. All remaining variants must then be interpreted using various tools/databases. The software supports the use and visualisation of data from these tools, enabling fast and efficient interpretation — including through an AI tool that proposes the most likely causal variant for the disorder.
Legal Framework: Public Procurement Act 2012Type of assignmentDeliveriesNature of the assignmentGovernment assignmentProcedurePublicKeywordsbioinformatics, human geneticsMain assignment (CPV code)481800003 Medical softwarePlace of execution (NUTS code)NETHERLANDS (NL)TenderNedreference number577692Reference numberRDPB/S numberEuropean or nationalEuropeanPlanningCommencement of assignmentCompletion of assignmentClosing date20 May. 2026, 12:00Related publicationsApr 29 2026Announcement of an assignment general directive, standard arrangementMar 19 2026Announcement of an assignment general guideline, standard arrangement19 Mar. 2026Announcement of an assignment general guideline, standard arrangement Command Type: DeliveriesNature of the assignmentGovernment assignmentProcedurePublicKeywordsbioinformatics, human geneticsMain assignment (CPV code)481800003 Medical softwarePlace of execution (NUTS code)NETHERLANDS (NL)TenderNed characteristic577692Reference numberRDPB/S numberEuropean or nationalEuropeanPlanningStart of assignmentCompletion of assignmentClosing date20 May. 2026, 12:00Related publicationsApr 29 2026Announcement of an assignment general guideline, standard arrangement19 Mar. 2026Announcement of an assignment general directive, standard arrangementMar 19 2026Announcement of an assignment general guideline, standard arrangement Procedure: Public Keywords bioinformatics, human genetics Main assignment (CPV code) 481800003 Medical software Place of execution (NUTS code) NETHERLANDS (NL)TenderNedkenmerk577692Refer...

Documents

 Tender Notice

140347770.zip