Replacing Genome Variant Annotation, Filtering Tender - 138182411

Procurement Summary

Country: Netherlands

Summary: Replacing Genome Variant Annotation, Filtering and Interpretation Software

Deadline: 17 May 2026

Posting Date: 20 Mar 2026

Other Information

Notice Type: Tender

TOT Ref.No.: 138182411

Document Ref. No.: RD

Competition: ICB

Financier: Self Financed

Purchaser Ownership: Public

Tender Value: Refer Document

CPV Classification

48180000 - Medical software package

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Tender Details

Data from the sequencer is processed through a bioinformatics pipeline (currently GATK, soon transitioning to DRAGEN), which outputs all possible variants relative to the reference genome in tabular form in a VCF file. This VCF file is imported into the software, where annotation first takes place: all valid variants are separated from invalid variants based on quality parameters. Because this results in a large number of variants, they are subsequently filtered based on laboratory defined criteria, such as genomic position, population frequency, known pathogenicity based on literature or insilico prediction tools. All remaining variants must then be interpreted using various tools/databases. The software supports the use and visualisation of data from these tools, enabling fast and efficient interpretation — including through an AI tool that proposes the most likely causal variant for the disorder.
Legal Framework: Public Procurement Act 2012Type of assignmentDeliveriesNature of the assignmentGovernment assignmentProcedurePublicKeywordsbioinformatics, human geneticsMain assignment (CPV code)481800003 Medical softwarePlace of execution (NUTS code)NETHERLANDS (NL)TenderNedreference number577692Reference numberRDPB/S number1932892026European or nationalEuropeanPlanningCommencement of assignmentCompletion of assignmentClosing date17 May. 2026, 23:59Related publicationsMar 19 2026Announcement of an assignment general directive, standard arrangementMar 19 2026Announcement of an assignment general guideline, standard arrangement Type of Command: DeliveriesNature of the orderGovernment orderProcedurePublicKeywordsbioinformatics, human geneticsMain order (CPV code)481800003 Medical softwarePlace of execution (NUTS code)NETHERLANDS (NL)TenderNedreference number577692Reference numberRDPB/S number1932892026European or nationalEuropeanPlanningCommencement of assignmentCompletion of assignmentClosing date17 May. 2026, 23:59Related publicationsMar 19 2026Announcement of an assignment general guideline, standard arrangement19 Mar. 2026Announcement of an assignment general guideline, standard arrangement Procedure: PublicKeywordsbioinformatics, human geneticsMain assignment (CPVcode)481800003 Medical softwarePlace of execution (NUTS code)NETHERLANDS (NL)TenderNedreference number577692Reference numberRDPB/S number1932892026European or nationalEuropeanPlanningCommencement of assignmentCompletion of assignmentClosing date17 May. 2026, 23:59G...

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